PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for EC 4.2.1.122 as complete word(s)

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Found 8 characterized proteins with matching descriptions. 2 of these are heteromeric.

Fetched 8 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 7 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by cluster

Arabidopsis thaliana

P14671 tryptophan synthase, beta subunit (EC 4.2.1.122) from Arabidopsis thaliana
P14671 tryptophan synthase (EC 4.2.1.20) from Arabidopsis thaliana
PFams: PALP
470 amino acids: PaperBLAST, CDD (Cluster 1)

Q9FFW8 tryptophan synthase, beta subunit (EC 4.2.1.122) from Arabidopsis thaliana
Q9FFW8 tryptophan synthase (EC 4.2.1.20) from Arabidopsis thaliana
PFams: PALP
506 amino acids: PaperBLAST, CDD (Cluster 1)

Escherichia coli

b1261 tryptophan synthase subunit β (EC 4.2.1.122) from Escherichia coli K-12 substr. MG1655
P0A879 tryptophan synthase subunit β (EC 4.2.1.122) from Escherichia coli (strain K12)
P0A879 tryptophan synthase (EC 4.2.1.20) from Escherichia coli
PFams: PALP
397 amino acids: PaperBLAST, CDD (Cluster 1)

Psilocybe cubensis

A0A2U8JPY3 tryptophan synthase (indole-salvaging) (EC 4.2.1.122); tryptophan synthase (EC 4.2.1.20) from Psilocybe cubensis
PFams: Trp_syntA, PALP
700 amino acids: PaperBLAST, CDD (Singleton 1)

Thermococcus kodakarensis

Q5JDJ1 tryptophan synthase (indole-salvaging) (EC 4.2.1.122); tryptophan synthase (subunit 1/2) (EC 4.2.1.20) from Thermococcus kodakarensis
PFams: PALP
Heteromeric, 442 amino acids: PaperBLAST, CDD (Cluster 1)

Q9YGB0 tryptophan synthase β subunit (EC 4.2.1.122) from Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Q9YGB0 tryptophan synthase (indole-salvaging) (EC 4.2.1.122); tryptophan synthase (subunit 2/2) (EC 4.2.1.20) from Thermococcus kodakarensis
PFams: PALP
Heteromeric, 389 amino acids: PaperBLAST, CDD (Cluster 1)

Thermotoga maritima

P50909 β subunit of tryptophan synthase (EC 4.2.1.122) from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
P50909 tryptophan synthase (EC 4.2.1.20) from Thermotoga maritima
PFams: PALP
389 amino acids: PaperBLAST, CDD (Cluster 1)

Q9WZ09 tryptophan synthase β2 subunit (EC 4.2.1.122) from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: PALP
422 amino acids: PaperBLAST, CDD (Cluster 1)